biodbcore-000061

The Mouse Genome Database (MGD): Comprehensive Resource for Genetics and Genomics of the Laboratory Mouse
Mouse Genome Database




Basics
Country

USA
Taxonomic range

Database scope and data types

  • genes, pseudogenes, gene models including CDS and predicted proteins and non-coding RNAs Domain
  • cytogenetic markers Domain
  • genomic and genetic maps Domain
  • nucleotide and protein sequence associations Domain
  • spontaneous, induced, and genetically engineered mutant alleles Domain
  • transgenes Domain
  • QTL Domain
  • mutant and conditional phenotypes Domain
  • mouse models of human disease annotations Domain
  • Gene Ontology annotations Domain
  • mouse anatomy, mouse phenotype ontology, gene product names Domain
  • Gene nomenclature Domain
  • Strains Domain
  • SNPs Domain
  • protein domains (from InterPro) Domain
  • Mammalian orthologs Domain
  • literature citations Domain
  • experimental molecular reagents Domain
  • functional genomics (gene expression) Domain
  • biochemical pathways Domain
  • Images of phenotypic mutants and gene expression Domain
  • links to other tools and other database resources Domain
Standards
Guidelines

No guidelines defined
Semantic

Syntax

Access
Condition of Use

  • Free


Data Access

  • homepage
  • file download(tab-delimited,images)
  • web service (XML)
  • FTP download
Curation Process

  • manual curation
Release Process

  • weekly release
Versioning Process

Support
Support

rss
blog





Tools
Credits
Maintaining Organisations

  • The Jackson Laboratory, Bar Harbor, ME 04609, USA.
  • The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA.
  • The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.
  • The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.
  • The Jackson Laboratory 600 Main Street, Bar Harbor, ME 04609, USA.
  • The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.
  • The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.
Funding Organisations

  • NHGRI NIH HHS
  • NHGRI NIH HHS
  • NHGRI NIH HHS
  • NHGRI NIH HHS
  • NHGRI NIH HHS
  • NHGRI NIH HHS
  • NHGRI NIH HHS
Publications

The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics. Nucleic Acids Res. 2011
 Pubmed:21051359
The Mouse Genome Database: enhancements and updates. Nucleic Acids Res. 2010
 Pubmed:19864252
The Mouse Genome Database genotypes::phenotypes. Nucleic Acids Res. 2009
 Pubmed:18981050
The Mouse Genome Database (MGD): mouse biology and model systems. Nucleic Acids Res. 2008
 Pubmed:18158299
The mouse genome database (MGD): new features facilitating a model system. Nucleic Acids Res. 2007
 Pubmed:17135206
The Mouse Genome Database (MGD): updates and enhancements. Nucleic Acids Res. 2006
 Pubmed:16381933
The Mouse Genome Database (MGD): from genes to mice--a community resource for mouse biology. Nucleic Acids Res. 2005
 Pubmed:15608240

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