Standards

There are 556 standards in BioSharing partly compiled by linking to BioPortal, MIBBI and the Equator Network.

You can sort columns and browse the content, or you can filter on Reporting Guidelines, Terminology Artifacts or Exchange Formats.

Or you can filter on MIBBI Foundry reporting guidelines or OBO Foundry terminology artifacts.

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BioSharing ID Standard Name Full Name Type Foundry Domain(s) Covered Organisation
bsg-000097 OMRSE Ontology of Medically Related Social Entities terminology artifact
OMRSE administrators
bsg-000059 NEMO Neural ElectroMagnetic Ontologies terminology artifact NEMO administrators
bsg-000060 ENVO Environment Ontology terminology artifact ENVO
bsg-000061 MIRO Mosquito Insecticide Resistance Ontology terminology artifact Anobase curators
bsg-000062 EO plant Environmental conditions Ontology terminology artifact EO administrators
bsg-000063 BTO BRENDA tissue / enzyme source terminology artifact BTO administrators
bsg-000067 MO MGED Ontology terminology artifact FGED society; MO working group
bsg-000068 MS Mass Spectrometry terminology artifact HUPO-PSI initiative; MS administrators
bsg-000069 NMR Nuclear Magnetic Resonance terminology artifact MSI initiative
bsg-000070 OBI Ontology for Biomedical Investigations terminology artifact OBI consortium
bsg-000071 OCRe Ontology of Clinical Research terminology artifact OCRe administrators
bsg-000072 FBbi Biological Imaging methods terminology artifact FBbi administrators
bsg-000073 SEP Sample processing and separation techniques terminology artifact HUPO-PSI initiative; separation working group
bsg-000074 FuGEFlow FuGEFlow exchange format FICCS members
bsg-000082 EFO Experimental Factor Ontology terminology artifact EFO administrators
bsg-000085 ECO Evidence codes terminology artifact
bsg-000086 MIfMRI Minimum Information about an fMRI Study reporting guideline fMRI methods working group
bsg-000087 GelML Gel electrophoresis Markup Language exchange format HUPO- PSI; Separation working group
bsg-000088 BOOTStrep Gene Regulation Ontology terminology artifact BOOTStrep administrators
bsg-000089 GO Gene Ontology terminology artifact GO administrators
bsg-000090 GRO Gene Regulation Ontology terminology artifact GRO administrators
bsg-000091 OGI Ontology for Genetic Interval terminology artifact
bsg-000092 SBGN Systems Biology Graphical Notation exchange format SBGN community
bsg-000093 DOID Human disease terminology artifact DOID administrators
bsg-000094 FLU Influenza Ontology terminology artifact FLU administrators
bsg-000095 IDO Infectious disease terminology artifact IDO administrators
bsg-000096 NCIt NCI thesaurus terminology artifact
NCICB curators
bsg-000098 SNOMEDCT Systematized Nomenclature of Medicine-Clinical Terms terminology artifact SNOMEDCT administrators
bsg-000099 SOPHARM Suggested Ontology for PHARMacogenomics terminology artifact SOPHARM administrators
bsg-000101 VO Vaccine Ontology terminology artifact VO administrators
bsg-000102 HOM HOMology terminology artifact
HOM administrators
bsg-000104 IDOMAL Infection Disease Ontology Malaria terminology artifact
IDOMAL administrators
bsg-000105 IAO Information Artifact Ontology terminology artifact IAO administrators
bsg-000106 LOINC Logical Observation Identifier Names and Codes terminology artifact LOINC administrators
bsg-000107 OME-XML Open Microscopy Environment eXtensible Markup Language exchange format Open Microscopy Environment Wellcome Trust
bsg-000108 LiPrO Lipid Ontology terminology artifact
bsg-000109 AMIS Article Minimum Information Standard reporting guideline ANISEED working group
bsg-000111 imzML imaging mz Markup Language exchange format imzML working group
bsg-000112 mzML mz Markup Language exchange format HUPO-PSI initiative; mass spectrometry working group
bsg-000114 DICOM Digital Imaging and COmmunications in Medicine exchange format NEMA
bsg-000115 OGMS Ontology for General Medical Science terminology artifact OGMS administrators
bsg-000116 Define.xml Define eXtensible Markup Language exchange format
CDISC members
bsg-000120 MITAB Molecular Interaction Tabular exchange format HUPO- PSI; molecular interactions working group
bsg-000122 RNAO RNA Ontology terminology artifact RNAO administrators
bsg-000124 NIF_Cell Neuroscience Information Framework Cell terminology artifact NIF curators
bsg-000078 ISA-Tab Investigation Study Assay Tabular exchange format ISA community BBSRC
bsg-000171 MISFISHIE Minimum Information Specification For In Situ Hybridization and Immunohistochemistry Experiments reporting guideline FGED society; MISFISHIE working group
bsg-000173 MIGen Minimum Information About a Genotyping Experiment reporting guideline MIGen working group
bsg-000174 MINSEQE Minimal Information about a high throuput SEQuencing Experiment reporting guideline FGED society; MINSEQE working group
bsg-000176 MINIMESS Minimal Metagenome Sequence Analysis Standard reporting guideline
bsg-000179 MIMIx Minimum Information about a Molecular Interaction Experiment reporting guideline HUPO- PSI; molecular interactions working group
bsg-000180 MIASPPE Minimum Information About Sample Preparation for a Phosphoproteomics Experiment reporting guideline CSIC/UAB Proteomics Laboratory
bsg-000181 MIAPA Minimal Information About a Phylogenetic Analylsis reporting guideline
bsg-000182 MIAME/Plant Minimum Information About a Microarray Experiment involving Plants reporting guideline FGED society; MIAME plant working group
bsg-000183 MIAPAR Minimum Information about a Protein Affinity Reagent reporting guideline HUPO- PSI; molecular interactions working group
bsg-000184 MIAPE Minimum Information About a Proteomics Experiment reporting guideline HUPO-PSI initiative
bsg-000249 net alignment annotation Format net alignment annotation Format exchange format ENCODE
bsg-000126 NIF_GrossAnatomy Neuroscience Information Framework Gross Anatomy terminology artifact NIF curators
bsg-000127 MPATH Mouse PATHology terminology artifact MPATH administrators
bsg-000128 APO Ascomycete Phenotype Ontology terminology artifact APO
bsg-000129 MP Mammalian Phenotype terminology artifact JAX curators
bsg-000130 WBPhenotype C. elegans phenotype terminology artifact WBPhenotype administrators
bsg-000131 HP Human Phenotype Ontology terminology artifact HP administrators
bsg-000132 eVOC Expressed Sequence Annotation for Humans terminology artifact eVOC administrators
bsg-000134 PATO Phenotypic QualiTy Ontology terminology artifact PATO administrators
bsg-000135 IMR INOH Molecule Role terminology artifact INOH curators
bsg-000136 MI Molecular Interaction terminology artifact HUPO-PSI initiative; MI administrators
bsg-000138 MOD Protein MODification terminology artifact HUPO-PSI initiative; MOD administrators
bsg-000139 PRO PRotein Ontology terminology artifact PRO administrators
bsg-000141 CONSORT CONSOlidated standards of Reporting Trials reporting guideline CONSORT group
bsg-000143 CONSORT - UE CONsolidated Standards of Reporting Trials - Unofficial Extensions reporting guideline CONSORT group
bsg-000144 OBO_REL OBO ReLationship terminology artifact
OBO_REL administrators
bsg-000146 SpML Separation Markup Language exchange format HUPO- PSI; Separation working group
bsg-000147 TEDDY TErminology for the Description of DYnamics terminology artifact TEDDY administrators
bsg-000148 SED-ML Simulation Experiment Description Markup Language exchange format SED-ML editors
bsg-000150 SWO SoftWare Ontology terminology artifact SWO administrators
bsg-000151 SYMP Symptom Ontology terminology artifact SYMP administrators
bsg-000152 FBsp Fly taxonomy terminology artifact FBsp administrators
bsg-000153 TTO Teleost Taxonomy Ontology terminology artifact TTO administrators
bsg-000154 NCBITaxon NCBI Taxonomy terminology artifact NCBI curators
bsg-000156 BFO Basic Formal Ontology terminology artifact
BFO administrators
bsg-000157 PAR Protein Affinity Reagent terminology artifact HUPO-PSI initiative; MI administrators
bsg-000158 MIQAS Minimal Information for QTLs and Association Studies reporting guideline MIQAS working group
bsg-000160 MIPFE Minimal Information for Protein Functional Evaluation reporting guideline MIPFE working group
bsg-000162 BioDBCore Core Attributes of Biological Databases reporting guideline International Society for Biocuration;and;BioSharing initiative
bsg-000165 LAB LABboratory reporting guideline CDISC members
bsg-000166 MINEMO Minimal Information for Neural ElectroMagnetic Ontologies reporting guideline NEMO consortium
bsg-000167 MINI Minimum Information about a Neuroscience Investigation reporting guideline CARMEN consortium
bsg-000168 MIAME/Env Minimum Information about an ENVironmental transcriptomic experiment reporting guideline EG working group;grown into the;ISA community
bsg-000172 MIxS - MIGS/MIMS Minimum Information about a (Meta)Genome Sequence reporting guideline GSC consortium; MIGS/MIMS working group
bsg-000185 MIQE Minimum Information for Publication of Quantitative Real-Time PCR Experiments reporting guideline RDML consortium; MIQE working group
bsg-000178 MIRIAM Minimal Information Required In the Annotation of Models reporting guideline COMBINE
bsg-000005 ATO Amphibian Taxonomy Ontology terminology artifact ATO
bsg-000006 BILA Bilateria anatomy terminology artifact BILA administrators
bsg-000007 BSPO SPatial Ontology terminology artifact CARO administrators
bsg-000010 FBbt Drosophila gross anatomy terminology artifact FBbt administrators
bsg-000012 MAT Minimal Anatomical Terminology terminology artifact EMAP administrators
bsg-000013 PD_ST Platynereis Developmental STage terminology artifact PD_ST administrators
bsg-000015 SPD SpiDer Ontology terminology artifact SPD administrators
bsg-000017 VAO Vertebrate Anatomy Ontology terminology artifact VAO; Wasila Dahdul
bsg-000019 AAO Amphibian gross Anatomy Ontology terminology artifact AAO administrators
bsg-000021 DC_CL Dendritic cell terminology artifact DC CL administrators
bsg-000022 MFO Medaka Fish Ontology terminology artifact
bsg-000023 HAO Hymenoptera Anatomy Ontology terminology artifact HAO administrators
bsg-000024 DDANAT Dictyostelium Discoideum ANATomy terminology artifact
bsg-000025 TADS Tick Anatomy terminology artifact TADS administrators
bsg-000026 TGMA Mosquito gross anatomy terminology artifact Anobase curators
bsg-000027 EMAP Edinburgh Mouse Atlas Project terminology artifact EMAP curators
bsg-000028 MA Mouse Anatomy terminology artifact MA administrators
bsg-000029 PO Plant structure terminology artifact PO administrators
bsg-000030 TAO Teleost Anatomy Ontology terminology artifact TAO administrators
bsg-000031 ZFA Zebrafish anatomy and development terminology artifact ZFA administrators
bsg-000032 EHDA Edinburgh Human Developmental Anatomy (timed version) terminology artifact EMAP curators
bsg-000033 EHDAA Edinburgh Human Developmental Anatomy Abstract terminology artifact EMAP curators
bsg-000034 XAO Xenopus Anatomy Ontology terminology artifact Xenbase administrators
bsg-000039 CHEBI Chemical Entities of Biological Interest terminology artifact CHEBI administrators
bsg-000040 CHEMINF CHEMical INFormation Ontology terminology artifact CHEMINF administrators
bsg-000041 FIX Physico-chemical methods and properties terminology artifact ChEBI administrators
bsg-000042 REX Physico-chemical process terminology artifact ChEBI administrators
bsg-000043 IEV INOH Event Ontology terminology artifact INOH curators
bsg-000044 OPB Ontology of Physics for Biology terminology artifact
OPB administrators
bsg-000045 PW PathWay terminology artifact PW administrators
bsg-000047 BRO Biomedical Resource Ontology terminology artifact
BRO administrators
bsg-000048 ECG ElectroCardioGraphy Ontology terminology artifact ECG administrators
bsg-000049 SDTM Study Data Tabulation Model reporting guideline CDISC members
bsg-000050 CellML CellML exchange format CellML community
bsg-000051 SBO Systems Biology terminology artifact SBO administrators
bsg-000055 FBdv Drosophila development terminology artifact FBdv administrators
bsg-000056 PLO Parasite Life cycle Ontology terminology artifact PLO administrators
bsg-000046 SO Sequence Ontology exchange format SO administrators NIH
bsg-000186 MIARE Minimum Information About a RNAi Experiment reporting guideline MIARE informatics working group
bsg-000188 MIARE-TAB Minimum Information About a RNAi Experiment Tabular exchange format MIARE informatics working group
bsg-000189 MIATA Minimal Information About T Cell Assays reporting guideline MIATA consortium
bsg-000190 MIAME/Nutr Minimum Information about a Nutrigenomics experiment reporting guideline RSBI working group; grown into the;ISA community
bsg-000191 MIAME/Tox Minimum Information about a array-based toxicogenomics experiment reporting guideline RSBI working group; grown into the; ISA community
bsg-000192 MIMPP Minimal Information for Mouse Phenotyping Procedures reporting guideline Mouse Phenotype Database Integration consortium
bsg-000193 TBC Tox Biology Checklist reporting guideline
bsg-000194 GUID and LSID Applicability Statements Globally Unique Identifier and Life Science Identifier Applicability Statement reporting guideline TDWG members
bsg-000195 DwC Darwin Core terminology artifact
TDWG; Darwin Core task group
bsg-000196 TAPIR TDWG Access Protocol for Information Retrieval exchange format TDWG; TAPIR task group
bsg-000198 SDD Structured Descriptive Data exchange format TDWG; BD interest group
bsg-000199 TCS Taxonomic Concept transfer Schema exchange format TDWG; TNC interest group
bsg-000200 DELTA DEscription Language for TAxonomy exchange format TDWG members
bsg-000201 TDWG SDS TDWG Standards Documentation Specification reporting guideline TDWG members
bsg-000202 NCD Natural Collections Descriptions exchange format
TDWG; NCD interest group
bsg-000203 MRTG Multimedia Resources metadata schema terminology artifact
TDWG members
bsg-000204 ABCDDNA Access to Biological Collection Data DNA extension exchange format TDWG; ABCD task group
bsg-000205 binary sequence information Format binary sequence information Format exchange format
ENCODE
bsg-000206 Portable Network Graphics Portable Network Graphics exchange format
bsg-000207 ARLEQUIN Project Format ARLEQUIN Project Format exchange format
bsg-000209 Axt Alignment Format Axt Alignment Format exchange format ENCODE
bsg-000211 Browser Extensible Data Format Browser Extensible Data Format exchange format
ENCODE
bsg-000212 Big Browser Extensible Data Format Big Browser Extensible Data Format exchange format
ENCODE
bsg-000213 big Wiggle Format big Wiggle Format exchange format
ENCODE
bsg-000214 BitMaP image Format BitMaP image Format exchange format
bsg-000215 Binary Probe Map Format Binary Probe Map Format exchange format
bsg-000216 BRIX generated O Format BRIX generated O Format exchange format
bsg-000217 CHARMM Card File Format CHARMM Card File Format exchange format
bsg-000218 ChemDraw Native File Format ChemDraw Native File Format exchange format
bsg-000219 Affymetrix Raw Intensity Format Affymetrix Raw Intensity Format exchange format
bsg-000221 Chain Format for pairwise alignment Chain Format for pairwise alignment exchange format
bsg-000222 Crystallography InFormation Format Crystallography InFormation Format exchange format
bsg-000223 CLUSTAL-W Alignment Format CLUSTAL-W Alignment Format exchange format
bsg-000224 chemistry mark-up language chemistry mark-up language exchange format
bsg-000225 CLUSTAL-W Dendrogram Guide File Format CLUSTAL-W Dendrogram Guide File Format exchange format
bsg-000226 EMBL sequence format EMBL sequence format exchange format
bsg-000227 ENCODE peak information Format ENCODE peak information Format exchange format ENCODE
bsg-000228 FASTA Sequence Format FASTA Sequence Format exchange format
bsg-000229 FASTQ Sequence and Sequence Quality Format FASTQ Sequence and Sequence Quality Format exchange format
bsg-000230 Genome Annotation File version 1 Genome Annotation File version 1 exchange format
bsg-000231 Genome Annotation File version 2 Genome Annotation File version 2 exchange format
bsg-000232 GenBank Sequence Format GenBank Sequence Format exchange format
bsg-000233 Gene Prediction File Format Gene Prediction File Format exchange format ENCODE
bsg-000234 Gene Feature File version 1 Gene Feature File version 1 exchange format
bsg-000235 Gene Feature File version 3 Gene Feature File version 3 exchange format
bsg-000236 Graphics Interchange Format Graphics Interchange Format exchange format
bsg-000237 GenePattern GeneSet Table Format GenePattern GeneSet Table Format exchange format
bsg-000238 Gene Transfer Format Gene Transfer Format exchange format
bsg-000239 HMMER Format HMMER Format exchange format
bsg-000240 ISND sequence record XML ISND sequence record XML exchange format
bsg-000241 Joint Photographic Experts Group Format Joint Photographic Experts Group Format exchange format
bsg-000242 Multiple Alignment Format Multiple Alignment Format exchange format ENCODE
bsg-000243 microarray track data Browser Extensible Data Format microarray track data Browser Extensible Data Format exchange format
ENCODE
bsg-000244 Clustered Data Table Format Clustered Data Table Format exchange format
bsg-000245 Pre-Clustering File Format Pre-Clustering File Format exchange format
bsg-000246 mini Protein Data Bank Format mini Protein Data Bank Format exchange format
bsg-000247 MDL molfile Format MDL molfile Format exchange format
bsg-000248 Nimblegen Design File Format Nimblegen Design File Format exchange format
bsg-000220 CHADO XML interchange Format CHADO XML interchange Format exchange format
GMOD
bsg-000187 MIASE Minimum Information About a Simulation Experiment reporting guideline COMBINE
bsg-000250 Newick tree Format Newick tree Format exchange format
bsg-000251 Nimblegen Gene Data Format Nimblegen Gene Data Format exchange format
bsg-000252 New Hampshire eXtended Format New Hampshire eXtended Format exchange format
bsg-000253 nucleotide inFormation binary Format nucleotide inFormation binary Format exchange format ENCODE
bsg-000254 Open Biomedical Ontology Flat File Format Open Biomedical Ontology Flat File Format exchange format
bsg-000256 Personal Genome SNP Format Personal Genome SNP Format exchange format ENCODE
bsg-000257 Protein InFormation Resource Format Protein InFormation Resource Format exchange format
bsg-000258 Postscript Format Postscript Format exchange format
bsg-000259 BLAT alignment Format BLAT alignment Format exchange format
bsg-000260 MDL reaction Format MDL reaction Format exchange format
bsg-000262 Sample Tabular Format Sample Tabular Format exchange format
bsg-000263 Standard Flowgram Format Standard Flowgram Format exchange format
bsg-000265 Stockholm Multiple Alignment Format Stockholm Multiple Alignment Format exchange format
bsg-000266 Scalable Vector Graphics Scalable Vector Graphics exchange format
bsg-000267 TAIR annotation data Format TAIR annotation data Format exchange format
bsg-000268 Tagged Image File Format Tagged Image File Format exchange format
bsg-000269 UniProtKB XML Format UniProtKB XML Format exchange format
bsg-000271 Wiggle Format Wiggle Format exchange format ENCODE
bsg-000272 eXtensible Graph Markup and Modeling Language eXtensible Graph Markup and Modeling Language exchange format
bsg-000273 Structure Data Format Structure Data Format exchange format
bsg-000274 ICD10 International Classification of Diseases (ICD) version 10 terminology artifact World Health Organization
bsg-000275 EDAM EMBRACE Data and Methods Ontology terminology artifact
bsg-000276 EMO Enzyme Mechanism Ontology terminology artifact
bsg-000277 ICB ICM binary file Format exchange format
bsg-000278 MICEE Minimum Information about a Cardiac Electrophysiology Experiment reporting guideline
bsg-000281 MIDE Minimum Information required for a DMET Experiment reporting guideline Bioinformatics unit, CPGR (Centre for Proteomic and Genomic Research)
bsg-000282 KGML KEGG Mark-up Language exchange format Kanehisa Laboratories
bsg-000283 RDF schema Resource Description Framework schema exchange format
W3C
bsg-000284 CCPN data model Collaborative Computing Project for NMR exchange format CCPN
bsg-000285 NMR-STAR NMR Self-defining Text Archive and Retrieval format exchange format Biological Magnetic Resonance Data Bank
bsg-000286 graphML Graph Markup Language exchange format GraphML Project Group
bsg-000287 DAS Distributed Sequence Annotation System exchange format Cold Spring Harbour Laboratory
bsg-000288 BEDgraph BEDgraph exchange format CBSC UCSC
bsg-000289 phyloXML XML for evolutionary biology and comparative genomics. exchange format
bsg-000290 mmCIF macromolecular Crystallographic Information File exchange format PDB
bsg-000291 FYPO Fission Yeast Phenotype Ontology terminology artifact Pombase
bsg-000292 YPO Yeast Phenotypes terminology artifact Saccharomyces Genome Database
bsg-000293 Uniprot Tisslist Uniprot Tissues controlled vocabulary terminology artifact Uniprot
bsg-000294 MESH Medical Subject Headings terminology artifact
National Library of Medecine
bsg-000295 NEWT New Taxonomy database terminology artifact Uniprot
bsg-000296 DBN Dot Bracket Notation (DBN) - Vienna Format exchange format Institut fur Theoretische Chemie
bsg-000297 .ACE format .ACE format exchange format
bsg-002570 CBO Cell Behavior Ontology terminology artifact
bsg-002572 PR PRotein Ontology (PRO) terminology artifact PR Administrators
bsg-002573 SNPO SNP-Ontology terminology artifact SNPO Administrators
bsg-002574 ATMO African Traditional Medicine terminology artifact
bsg-002575 BT BioTop terminology artifact
BioTop Administrators
bsg-002576 GeoSpecies GeoSpecies Ontology terminology artifact
GeoSpecies Administrators
bsg-002577 LHN Loggerhead nesting terminology artifact LHN Administrators
bsg-002578 MeGO MeGO terminology artifact MeGO Administrators
bsg-002579 Pseudo Pseudogene terminology artifact
bsg-002580 FHHO Family Health History Ontology terminology artifact FHHO Administrators
bsg-002581 PO_PAE Plant Anatomy terminology artifact Plant Ontology Administrators
bsg-002582 OPB.properties Ontology of Physics for Biology terminology artifact
OPB
bsg-002583 MEDLINEPLUS MedlinePlus Health Topics terminology artifact
MedLinePlus Administrators
bsg-002584 BIRNLex BIRNLex terminology artifact BIRNLex Administrators
bsg-002585 BHO Bleeding History Phenotype terminology artifact BHO Administrators
bsg-002586 LNC Logical Observation Identifier Names and Codes terminology artifact LNC Administrators
bsg-002587 ZEA Maize gross anatomy terminology artifact ZEA Administrators
bsg-000264 SMILES Simplified Molecular Input Line Entry Specification Format exchange format
bsg-002588 GRO_CPD Cereal Plant Development terminology artifact Plant Ontology Administrators
bsg-002589 PDQ Physician Data Query terminology artifact
bsg-002590 OPL Ontology for Parasite LifeCycle terminology artifact OPL Administrators
bsg-002591 CPTAC Proteomics Pipeline Infrastructure for CPTAC terminology artifact
bsg-002592 NDFRT National Drug File terminology artifact NDFRT Administrators
bsg-002593 CPR Computer-based Patient Record Ontology terminology artifact CPR Administrators
bsg-002594 PRO Ont Protein Ontology terminology artifact PRO Administrators
bsg-002595 CST COSTART terminology artifact
CST Administrators
bsg-002596 BCGO Breast Cancer Grading Ontology terminology artifact
bsg-002597 ICPC International Classification of Primary Care terminology artifact
bsg-002598 EV eVOC (Expressed Sequence Annotation for Humans) terminology artifact Evoc Administrators
bsg-002599 DermLex DermLex: The Dermatology Lexicon terminology artifact DermLex Administrators
bsg-002600 PEO Parasite Experiment Ontology terminology artifact
PEO Administrators
bsg-002601 WHO WHO Adverse Reaction Terminology terminology artifact WHO
bsg-002602 HC Habronattus courtship terminology artifact
HC Administrators
bsg-002603 BPMetadata BioPortal Metadata terminology artifact
BP Administrators
bsg-002604 PO PSDS Plant Structure Development Stage terminology artifact PO Administrators
bsg-002605 FAO Fungal gross anatomy terminology artifact FAO Administrators
bsg-002606 ABA ABA Adult Mouse Brain terminology artifact ABA Administrators
bsg-002607 GALEN Galen terminology artifact
bsg-002608 MAO Multiple alignment terminology artifact
MAO Administrators
bsg-002609 ACGT Cancer Research and Management ACGT Master Ontology terminology artifact
ACGT Administrators
bsg-002610 ClinicalTrialOntology Epoch Clinical Trial Ontologies terminology artifact
bsg-002611 UO Units of measurement terminology artifact
UO Administrators
bsg-002612 Field PhysicalFields terminology artifact
Field Administrators
bsg-002613 ODGI Ontology for disease genetic investigation terminology artifact
bsg-002614 FBcv FlyBase Controlled Vocabulary terminology artifact FBcv Administrators
bsg-002615 OMIM Online Mendelian Inheritance in Man terminology artifact OMIM Administrators
bsg-002616 SPO Skin Physiology Ontology terminology artifact SPO Administrators
bsg-002617 EP Cardiac Electrophysiology Ontology terminology artifact
EP Administrator
bsg-002618 CDAO Comparative Data Analysis Ontology terminology artifact CDAO Administrators
bsg-002619 MHC MaHCO - An MHC Ontology terminology artifact
MHC Administrators
bsg-002620 MCCL Cell line ontology terminology artifact
MCCL Administrators
bsg-002621 SBRO Smoking Behavior Risk Ontology terminology artifact
bsg-002622 ProPreO Proteomics data and process provenance terminology artifact
ProPreO Administrators
bsg-002623 SitBAC Situation-Based Access Control terminology artifact
SitBAC Administrators
bsg-002624 OGR Ontology of Geographical Region terminology artifact
bsg-002625 RS Rat Strain Ontology terminology artifact
RS Administrators
bsg-002626 ICD9CM International Classification of Diseases terminology artifact
ICD9CM Administrators
bsg-002627 CLO Cell Line Ontology terminology artifact CLO Administrators
bsg-002628 NIF NIFSTD terminology artifact
NIF Administrators
bsg-002629 Amino Acid Amino Acid terminology artifact AA Administrators
bsg-002630 Basic Vertebrate Anatomy Basic Vertebrate Anatomy terminology artifact
bsg-002631 GRO CPGA Cereal plant gross anatomy terminology artifact GRO Administrators
bsg-002632 OGMD Ontology of Glucose Metabolism Disorder terminology artifact OGMD Administrator
bsg-002633 RID RadLex terminology artifact
RadLex Administrators
bsg-002634 NPO NanoParticle Ontology terminology artifact NPO Administrators
bsg-002635 SSO Syndromic Surveillance Ontology terminology artifact
bsg-002636 GAZ Gazetteer terminology artifact
bsg-002637 LDA Ontology of Language Disorder in Autism terminology artifact
bsg-002638 POL Pilot Ontology terminology artifact
bsg-002639 ICNP International Classification for Nursing Practice terminology artifact
bsg-002641 PKO PKO_Re terminology artifact
bsg-002642 KiSAO Kinetic Simulation Algorithm Ontology terminology artifact KiSAO Administrators
bsg-002643 ICF International Classification of Functioning, Disability and Health (ICF) terminology artifact
ICF Administrators
bsg-002644 CTCAE Common Terminology Criteria for Adverse Events terminology artifact
CTCAE Administrators
bsg-002645 TOK TOK_Ontology terminology artifact
TOK Administrators
bsg-002646 TAXRANK Taxonomic rank vocabulary terminology artifact
TAXRANK Administrators
bsg-002647 MDR MedDRA terminology artifact
MedDRA Administrators
bsg-002648 RXNORM RxNORM terminology artifact
bsg-002649 NDDF National Drug Data File terminology artifact
bsg-002650 ICD10PCS ICD-10-PCS terminology artifact
ICD10PCS Administrators
bsg-002651 MDDB Master Drug Data Base terminology artifact MDDB Administrators
bsg-002652 RCD Read Codes, Clinical Terms Version 3 (CTV3) terminology artifact
bsg-002653 NIC Nursing Interventions Classification (NIC) terminology artifact
NIC Administrators
bsg-002654 ICPC2P ICPC-2 PLUS terminology artifact
ICPC2P Administrators
bsg-002655 AIR AI/RHEUM terminology artifact
bsg-002656 MCBCC Breast tissue cell lines terminology artifact MCBCC Administrators
bsg-002657 GFO General Formal Ontology terminology artifact
GFO Administrators
bsg-002658 GFO-Bio General Formal Ontology: Biology terminology artifact
GFO Bio Administrators
bsg-002659 HL7 Health Level Seven terminology artifact
HL7 Administrators
bsg-002660 TMO Translational Medicine Ontology terminology artifact
TMO Administrators
bsg-002661 ICECI International Classification of External Causes of Injuries terminology artifact
WHO
bsg-002662 Body System Body System terminology artifact
bsg-002663 JERM SysMO-JERM terminology artifact
JERM Administrators
bsg-002664 OAE Ontology of Adverse Events (OAE) terminology artifact
OAE Administrators
bsg-002665 IMGT IMGT-ONTOLOGY terminology artifact IMGT Administrators
bsg-002666 TMA Tissue Microarray Ontology terminology artifact
bsg-002667 PMA PMA 2010 terminology artifact
bsg-002668 NeoMarkOntology Neomark Oral Cancer-Centred Ontology terminology artifact
NeoMarkOntology Administrators
bsg-002669 CPT Current Procedural Terminology terminology artifact
CPT Administrators
bsg-002670 OMIT Ontology for MicroRNA Target Prediction terminology artifact OMIT Administrators
bsg-002671 CCO Cell Cycle Ontology terminology artifact CCO Administrators
bsg-002672 ICPS ICPS Network terminology artifact
ICPS Administrators
bsg-002673 MTHCH Metathesaurus CPT Hierarchical Terms terminology artifact
U.S. National Library of Medicine (NLM)
bsg-002674 INO Interaction Network Ontology terminology artifact INO Administrators
bsg-002675 EHDAA2 Human developmental anatomy, abstract version, v2 terminology artifact EHDAA2 Administrators
bsg-002676 LSM Leukocyte Surface Markers terminology artifact
bsg-002677 NeuMORE Neural Motor Recovery Ontology terminology artifact
NeuMORE Administrators
bsg-002678 BP BioPAX terminology artifact BP Administrators
bsg-002679 OBOE SBC OBOE SBC terminology artifact
OBOE Administrators
bsg-002680 OBOE OBOE terminology artifact
OBOE Administrators
bsg-002681 CSP CRISP Thesaurus, 2006 terminology artifact
NIH Library of Medicine
bsg-002682 VANDF VANDF terminology artifact
VANDF Administrators
bsg-002683 HUGO HUGO terminology artifact
HUGO Administrators
bsg-002684 HCPCS HCPCS terminology artifact
HCPCS Administrators
bsg-002685 ADW Animal natural history and life history terminology artifact ADW Administrators
bsg-002687 BAO BioAssay Ontology terminology artifact BAO Administrators
bsg-002688 Apollo-SV Apollo-SV terminology artifact
Apollo Administrators
bsg-002689 TAHH Terminology of Anatomy of Human Histology terminology artifact
bsg-002690 TAHE Terminology of Anatomy of Human Embryology terminology artifact
bsg-002691 IDOBRU Brucellosis Ontology terminology artifact
IDOBRU Administrators
bsg-002692 RoleO Role Ontology terminology artifact
RoleO Administrators
bsg-002693 NIGO Neural-Immune Gene Ontology terminology artifact
bsg-002694 DDI Ontology for Drug Discovery Investigations terminology artifact
DDI Administrators
bsg-002695 CO Crop Ontology terminology artifact CO Administrators
bsg-002696 CO_Wheat Wheat trait terminology artifact CO Administrators
bsg-002697 PHARE PHARE terminology artifact
bsg-002698 REPO Reproductive trait and phenotype ontology terminology artifact
bsg-002699 ICD10CM ICD10CM terminology artifact
ICD10CM Administrators
bsg-002700 CogPO Cognitive Paradigm Ontology terminology artifact
bsg-002701 PVOnto Pharmacovigilance Ontology terminology artifact
PVOnto Administrators
bsg-002702 HPIO Host Pathogen Interactions Ontology terminology artifact
bsg-002703 TM-CONST Traditional Medicine Constitution Value Set terminology artifact
TM Administrators
bsg-002704 TM-OTHER-FACTORS Traditional Medicine Other Factors Value Set terminology artifact
TM Administrators
bsg-002705 TM-SIGNS-AND-SYMPTS Traditional Medicine Signs and Symptoms Value Set terminology artifact
TM Administrators
bsg-002706 TM-MER Traditional Medicine Meridian Value Sets terminology artifact
TM Administrators
bsg-002707 ExO Exposure Ontology terminology artifact
bsg-002708 FDA-MedDevice FDA Medical Devices (2010) terminology artifact
bsg-002710 AERO Adverse Event Reporting ontology terminology artifact
bsg-002711 HLTH_INDICS HEALTH_INDICATORS terminology artifact
AERO Administrators
bsg-002712 CAO CAO terminology artifact
bsg-002713 CMO Clinical Measurement Ontology terminology artifact
CAO Administrators
bsg-002714 MMO Measurement Method Ontology terminology artifact CMO Administrators
bsg-002715 XCO Experimental Conditions Ontology terminology artifact MMO Administrators
bsg-002716 OntoOrpha Orphanet Ontology of Rare Diseases terminology artifact XCO Administrators
bsg-002717 OntoDT Ontology of General Purpose Datatypes terminology artifact
bsg-002719 BDO Bone Dysplasia Ontology terminology artifact OntoDT Administrators
bsg-002720 IxnO IxnO terminology artifact
bsg-002721 Chem2Bio2OWL Systems Chemical Biology/Chemogenomics terminology artifact
bsg-002729 WSIO Web-Service Interaction Ontology terminology artifact
WISO Administrators
bsg-002730 CogAt Cognitive Atlas terminology artifact COGAT Administrators
bsg-002731 OntoDM Ontology of Data Mining terminology artifact
OntoDM Administrators
bsg-002732 EpilepOnto Epilepsy terminology artifact
EpilepOnto Administrators
bsg-002733 PedTerm Pediatric Terminology terminology artifact
bsg-002740 UnitsOntology Units Ontology terminology artifact UnitsOntology Administrators
bsg-002741 SDO Sleep Domain Ontology terminology artifact SDO Administrators
bsg-002745 PharmGKB-OWL PharmGKB-in-OWL terminology artifact
PharmGKB OWL Administrators
bsg-002746 phenomeblast-owl PhenomeBLAST ontology terminology artifact PhenomeBlast Administrators
bsg-002747 CAMRQ Quadrupedal Gait terminology artifact
bsg-002748 invertebrata Hewan Invertebrata terminology artifact Invertebrata Administrators
bsg-002749 VT Vertebrate Trait Ontology terminology artifact
bsg-002752 SHR Student Health Record terminology artifact
SHR Administrators
bsg-002753 MFOEM Emotion Ontology terminology artifact MFOEM Administrators
bsg-002756 ICDO3 ICD_Oncology-3 terminology artifact
bsg-002757 QIBO Quantitative Imaging Biomarker Ontology terminology artifact
bsg-002758 DIKB-Evidence DIKB-Evidence-Ontology terminology artifact
DIKB Administrators
bsg-002759 CEEROntology CEEROntology terminology artifact
bsg-002760 RCTOntology Randomized Controlled Trials (RCT) Ontology terminology artifact
bsg-002765 BIOA BioActivity Ontology terminology artifact
bsg-002766 NeoMark Neomark Oral Cancer Ontology terminology artifact NeoMark Administrators
bsg-002767 UCBH UniprotCoreBH terminology artifact
bsg-002773 DATASRC-ORTHO HOM-DATASRC-ORTHO terminology artifact
bsg-002774 VIVO VIVO terminology artifact
VIVO Administrators
bsg-002776 EUFUT Eurofut terminology artifact
bsg-002777 MCV MIxS Controlled Vocabularies terminology artifact
bsg-002779 MF Mental Functioning Ontology terminology artifact
MF Administrators
bsg-002780 CNO Computational Neuroscience Ontology terminology artifact
bsg-002781 NatPrO Natural Products Ontology terminology artifact
bsg-002782 OoEVV Ontology of Experimental Variables and Values terminology artifact OoEVV Administrators
bsg-002784 CareLex CareLex terminology artifact
CareLex Administrators
bsg-002785 MEO Metagenome/Microbes Environmental Ontology terminology artifact MEO Administrators
bsg-002786 NonRCTOntology Non Randomized Controlled Trials Ontology terminology artifact
bsg-002787 DiagnosticOnt Diagnostic Ontology terminology artifact
bsg-002788 PhyMeRe Physical Medicine and Rehabilitation terminology artifact
bsg-002789 PMR Physical Medicine and Rehabilitation terminology artifact
bsg-002790 ERO eagle-i research resource ontology terminology artifact
ERO Administrators
bsg-002791 GCC Gastroenterology Clinical Cases terminology artifact
bsg-002792 RH-MESH Robert Hoehndorf's Version of MeSH terminology artifact
RH-MESH Administrators
bsg-002793 CPO Cell Phenotype Ontology terminology artifact CPO Administrators
bsg-002794 ATC Anatomical Therapeutic Chemical (ATC) Classification (OWL version) terminology artifact
ATC Administrators
bsg-002795 BioModels BioModels Ontology terminology artifact BioModels Administrators
bsg-002796 PTSD PTSD terminology artifact
bsg-002797 CTX Cerebrotendinous xanthomatosis terminology artifact CTX Administrators
bsg-002798 SOY SoyOntology terminology artifact SOY Administrators
bsg-002799 SPTO Solanaceae Phenotype Ontology terminology artifact
SPTO Administrators
bsg-002800 CanCO Cancer Chemoprevention Ontology terminology artifact
bsg-002801 QUDT Quantities, Units, Dimensions and Types terminology artifact QUDT Administrators
bsg-002803 thesaurus thesaurus terminology artifact
bsg-002804 ontologia Ontologia proj alternativa terminology artifact
bsg-002805 thealternativa thesaurus alternativa terminology artifact
bsg-002811 uni-ece uni-ece terminology artifact
bsg-002812 PFO Phenotype Fragment Ontology terminology artifact
bsg-002813 PhenXTK PhenX Toolkit terminology artifact PhenXTK Administrators
bsg-002814 BO BOOK terminology artifact
bsg-002815 i2b2-patvisdims i2b2-patient_visit_dimensions terminology artifact
bsg-002817 OntoDM-KDD Ontology of Data Mining Investigations terminology artifact
bsg-002818 PhenX PhenX Terms terminology artifact
bsg-002821 DwC_translations Darwin Core translations terminology artifact
DWC Administrators
bsg-002822 OntoMA SANOU terminology artifact
OntoMA Administrators
bsg-002827 CCONT Cell Culture Ontology terminology artifact
bsg-002828 RPO RAPID Phenotype Ontology terminology artifact RPO Administrators
bsg-002829 OBIws Bioinformatics Web Service Ontology terminology artifact
OBIws Administrators
bsg-002830 PCO Population and Community Ontology terminology artifact PCO Administrators
bsg-002831 ReXO Regulation of Gene Expression Ontolology terminology artifact
bsg-002832 ReTO Regulation of Transcription Ontolology terminology artifact
bsg-002833 GeXO Gene Expression Ontology terminology artifact
bsg-002834 VSO Vital Sign Ontology terminology artifact
VSO Administrators
bsg-002835 NIF-Subcell NIF-Subcellular terminology artifact
bsg-002836 ImmDis Immune Disorder Ontology terminology artifact
bsg-002837 ConsentOntology InformedConsentPermissionOntology terminology artifact
bsg-000065 PRISMA Preferred Reporting Items for Systematic reviews and Meta-Analyses reporting guideline PRISMA members
bsg-000066 TREND Transparent Reporting of Evaluations with Non-randomized Designs reporting guideline TREND group
bsg-000002 mzIndentML mz peptide and protein Identification Markup Language exchange format HUPO-PSI initiative; proteomics informatics working group
bsg-000003 mzQuantML mz Quantitative Markup Language exchange format HUPO-PSI initiative; proteomics informatics working group
bsg-000004 AEO Anatomical Entity Ontology terminology artifact
bsg-000008 CARO Common Anatomy Reference Ontology terminology artifact CARO administrators
bsg-000009 CL Cell type terminology artifact CL
bsg-000011 FMA Foundational Model of Anatomy terminology artifact FMA administrators
bsg-000014 SAO Subcellular Anatomy Ontology terminology artifact SAO administrators
bsg-000016 UBERON UBER anatomy ONtology terminology artifact UBERON administrators
bsg-000018 vHOG verteberate Homologous Organ Groups terminology artifact Bgee team
bsg-000020 WBbt C. elegans gross anatomy terminology artifact WBbt administrators
bsg-000035 ARRIVE Animals in Research: Reporting In Vivo Experiments reporting guideline NC3Rs members
bsg-000036 SEND Standard for Exchange of Nonclinical Data reporting guideline CDISC members
bsg-000037 STREGA STrengthening the REporting of Genetic Association Studies reporting guideline STREGA group
bsg-000038 BioPAX Biological Pathway eXchange exchange format BioPAX community
bsg-000052 SBML System Biology Markup Language exchange format SMBL community
bsg-000053 CDASH Clinical Data Acquisition Standards Harmonization reporting guideline CDISC members
bsg-000054 Gating-ML Gating-ML exchange format FICCS members
bsg-000057 WBls C. elegans development terminology artifact WBls administrators
bsg-000058 STARD STAndards for the Reporting of Diagnostic accuracy reporting guideline STARD initiative
bsg-000064 STROBE STrengthening the Reporting of OBservational studies in Epidemiology reporting guideline STROBE group
bsg-000075 FuGE-ML Functional Genomics Experiment Markup Language exchange format FuGE working group
bsg-000076 MINiML MIAME Notation in Markup Language exchange format GEO repository
bsg-000077 SOFT Simple Omnibus Format in Text exchange format GEO repository
bsg-000079 GCDML Genomic Contextual Data Markup Language exchange format GSC consortium; GCDML working group
bsg-000080 MAGE-Tab MicroArray Gene Expression Tabular exchange format FGED society; MAGE working group
bsg-000081 NDTF Neurophysiology Data Translation Format exchange format CARMEN consortium
bsg-000083 MIQAS-TAB Minimal Information for QTLs and Association Studies Tabular exchange format MIQAS working group
bsg-000084 SRA-XML Short Read Archive eXtensible Markup Language exchange format
bsg-000159 MIABE Minimum Information About a Bioactive Entity reporting guideline HUPO- PSI; MIABE working group
bsg-000103 ORION Outbreak Reports and Intervention studies Of Nosocomial infection reporting guideline ORION group
bsg-000110 REFLECT Reporting guidElines For randomized controLled trials for livEstoCk and food safeTy reporting guideline REFLECT members
bsg-000113 TraML Transition Markup Language exchange format HUPO-PSI initiative; mass spectrometry working group
bsg-000117 ODM Operational Data Model exchange format CDISC members
bsg-000118 MCL Microbiological Common Language exchange format Straininfo.net developers
bsg-000119 CML Chemical Markup Language exchange format CML authors Peter Murray-Rust and Henry Rzepa
bsg-000121 PSI-MI XML Molecular Interaction eXtensible Markup Language exchange format HUPO- PSI; molecular interactions working group
bsg-000123 NeuroML Neuroscience eXtensible Markup Language exchange format NeuroML community
bsg-000125 NIF_Dysfunction Neuroscience Information Framework Dysfunction terminology artifact NIF curators
bsg-000137 PSI-PAR XML Protein Affinity Reagent eXtensible Markup Language exchange format HUPO- PSI; molecular interactions working group
bsg-000140 RDML Real-time PCR Data Markup Language exchange format RDML consortium
bsg-000142 CONSORT - OE CONSOlidated Standards of Reporting Trials - Official Extensions reporting guideline CONSORT group
bsg-000145 PRM Protocol Representation Model exchange format CDISC members
bsg-000149 SBRML Systems Biology Results Markup Language exchange format SED-ML collaborators
bsg-000155 REMARK REporting recommendations for tumour MARKer prognostic studies reporting guideline REMARK group
bsg-000164 MIACA Minimal Information About a Cellular Assay reporting guideline The Cell Based Assay Standards Consortium
bsg-000169 STRENDA Standards for Reporting Enzymology Data reporting guideline STRENDA commission
bsg-000001 ADaM Analysis Data Model reporting guideline CDISC members
bsg-000516 MIAPE-Quant MIAPE Mass Spectrometry Quantification reporting guideline HUPO-PSI
bsg-000519 GPAD 1.1 Gene Product Annotation Data exchange format Gene Ontology Consortium
bsg-000522 AGP format A Gold Path format exchange format National Center for Biotechnology Information , US National Library of Medicine 8600 Rockville Pike , Rockville, MD USA 20894
bsg-000255 PDB Protein Data Bank Format exchange format
bsg-000523 MIRAGE MS Guidelines Minimum Information Required for A Glycomics Experiment - MS Guidelines reporting guideline Beilstein-Institut CCRC, University of Athens, GA, USA
bsg-000524 MLHIM Multilevel Healthcare Information Modeling exchange format National Institute of Science and Technology - Medicine Assisted by Scientific Computing Rio de Janeiro State University Fluminense Federal University CNPq Faperj
bsg-000525 openEHR openEHR Health Record Specification terminology artifact openEHR Foundation
bsg-000526 NI-DM Neuroimaging Data Model exchange format INCF BIRN
bsg-000161 MIxS - MIMARKS Minimum Information about a MARKer gene Sequence reporting guideline GSC consortium; MIMARKS working group
bsg-000208 ASN.1 Abstract Syntax Notation One exchange format
bsg-000518 MIxS Minimum Information about any (X) Sequence reporting guideline GSC consortium; MIxS working group
bsg-000520 GPI Gene Product Information Format exchange format Gene Ontology Consortium
bsg-000521 MIFlowCyt Minimum Information about Flow Cytometry reporting guideline
bsg-000517 ISA-TAB-Nano ISA-TAB-Nano exchange format
bsg-000528 EDF European Data Format exchange format
bsg-000529 NEXML Nexus XML exchange format University of North Carolina
bsg-000530 GlycoCT XML GlycoCT sequence format for carbohydrates. exchange format German Cancer Research Center
bsg-000531 VEP Variant Effect Predictor data format exchange format
bsg-000527 NIFTI NIfTI-1 Data Format exchange format National Institutes of Health
bsg-000533 Multi-Omics Metadata Checklist Multi-Omics Metadata Checklist reporting guideline
Seattle Children's Research Institute
bsg-000175 CIMR Core Information for Metabolomics Reporting reporting guideline