Databases > biodbcore-000556

ready Xenopus laevis and tropicalis biology and genomics resource

Abbreviation:Xenbase

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General Information
Xenbase is the model organism database for Xenopus laevis and X. (Silurana) tropicalis. It contains genomic, development data and community information for Xenopus research. It includes gene expression patterns that incorporate image data from the literature, large scale screens and community submissions.

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Record updated: July 13, 2016, 8:18 p.m. by allysonlister.



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License: No reuse without permision


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Credit

Record Maintainer

  • This record is maintained by xenbase

Funding agency

Maintainer

Grant Number(s)

  • P41 HD064556 (US National Institute of Child Health and Development (NICHD))


Publications

Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes

•JB Karpinka, JD Fortriede, KA Burns, C James-Zorn; VG Ponferrada; J Lee; K Karimi; AM Zorn; PD Vize
Nucleic Acids Res. 2014

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The Virtual Xenbase: transitioning an online bioinformatics resource to a private cloud

K Karimi and PD Vize
Database 2014

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Xenbase: gene expression and improved integration.

Bowes JB,Snyder KA,Segerdell E,Jarabek CJ,Azam K,Zorn AM,Vize PD
Nucleic Acids Res 2009

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Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase.

Segerdell E,Ponferrada VG,James-Zorn C,Burns KA,Fortriede JD,Dahdul WM,Vize PD,Zorn AM
J Biomed Semantics 2013

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Xenopus genomic data and browser resources.

Vize PD,Zorn AM
Dev Biol 2016

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