A catalogue of databases, described according to the BioDBcore guidelines, along with the standards used within them; partly compiled with the support of Oxford University Press (NAR Database Issue and DATABASE Journal) and Re3Data.org.


21 records in view

Registry Name Abbreviation Type Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

Bacterial protein tYrosine Kinase database BYKdb Database None None None ready

ConoServer ConoServer Database None None ready

Database of Bacterial Exotoxins for Human DBETH Database None None None ready

Human Histone Database HIstome Database None None None ready

NucleaRDB NucleaRDB Database None None uncertain

Pfam Protein Families Pfam Database ready

Pocketome: an encyclopedia of small-molecule binding sites in 4D Pocketome Database None None None ready

SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants SNPeffect 4.0 Database None None ready

BacMap BacMap Database None None None ready

Gene3D Gene3D Database None None ready

SitEx database of eukaryotic protein functional sites SitEx Database None None None ready

Termini-Oriented Protein Function INferred Database TopFIND Database None None None ready

TTD, Therapeutic Target Database TTD, Therapeutic Target Database Database None None None ready

YMDB YMDB Database None None ready

PDB-REPRDB PDB-REPRDB Database None None None ready

European Hepatitis C Virus database euHCVdb Database None None None None ready

Sequence-Structural Templates of Single-member Superfamilies SSToSS Database None None None None ready

MEROPS MEROPS Database None ready

HAMAP database of microbial protein families HAMAP Database None None ready

Bio-Mirror Bio-Mirror Database None None None None ready

Proteome-pI : proteome isoelectric point database Proteome-pI Database None None ready