Image for Metabolomics Standards and Databases  Metabolomics Standards and Databases
The Metabolomics Standards and Databases collection in BioSharing lists the standards and databases relevant to the metabolomics field, as identified in the article "Data standards can boost metabolomics research, and if there is a will, there is a way", Metabolomics, January 2016, 12:14.

This record is maintained by: agbeltran   ORCID

Record updated: Nov. 2, 2016, 11:37 a.m. by allysonlister.

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15 records in view

Registry Name Abbreviation Type Domain Taxonomy Related Database Related Standard Related Policy In Collection/Recommendation Status

Core Information for Metabolomics Reporting CIMR Standard None None ready

imaging mz Markup Language imzML Standard None None ready

IUPAC International Chemical Identifier InChI Standard None ready

Investigation Study Assay Tabular ISA-Tab Standard ready

Joint Committee on Atomic and Molecular Physical data - working group on Data eXchange JCAMP-DX Standard None None None uncertain

Metabolomics Workbench MW Database None None None ready

MetaboLights MTBLS Database ready

mz5 mz5 Standard None None ready

mzData mzData Standard None None deprecated

mz Markup Language mzML Standard ready

mzXML mzXML Standard None None deprecated
Nuclear Magnetic Resonance Controlled Vocabulary nmrCV Standard None ready

Nuclear Magnetic Resonance Markup Language NMR-ML Standard None ready

Simplified Molecular Input Line Entry Specification Format SMILES Standard None None ready

eXtensible Experiment Markup Language XEML Standard None None ready